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This commit is contained in:
Alex Goodman 2016-11-15 01:03:07 -08:00
parent 42da31ceb4
commit 3a76958ca3
1 changed files with 5 additions and 7 deletions
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12
testing/install_external_dependencies.sh
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@ -22,20 +22,18 @@ touch ~/.environ
# Install R dependencies if R profiles are used
if [[ ${PROFILE/"-Pr "} != $PROFILE ]] || [[ ${PROFILE/"-Psparkr "} != $PROFILE ]] ; then
mkdir -p ~/R
echo "R_LIBS=~/R" > ~/.Renviron
echo "export R_LIBS=~/R" >> ~/.environ
source ~/.environ
R -e "install.packages('knitr', repos = 'http://cran.us.r-project.org', lib='~/R')"
if [[ ! -d "$HOME/R/knitr" ]] ; then
mkdir -p ~/R
R -e "install.packages('knitr', repos = 'http://cran.us.r-project.org', lib='~/R')"
fi
fi
# Install Python dependencies for Python specific tests
if [[ -n "$PYTHON" ]] ; then
if [[ "$PYTHON" == "2" ]] ; then
wget https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh -O miniconda.sh
else
wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
fi
wget https://repo.continuum.io/miniconda/Miniconda${PYTHON}-latest-Linux-x86_64.sh -O miniconda.sh
bash miniconda.sh -b -p $HOME/miniconda
echo "export PATH='$HOME/miniconda/bin:$PATH'" >> ~/.environ
source ~/.environ